Basic Information | |
---|---|
Species | Physcomitrella patens |
Cazyme ID | Pp1s138_47V6.1 |
Family | CBM43 |
Protein Properties | Length: 521 Molecular Weight: 55537.6 Isoelectric Point: 6.6665 |
Chromosome | Chromosome/Scaffold: 138 Start: 219895 End: 223232 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM43 | 405 | 487 | 2.8e-26 |
WCIAKSSASNTSLIQGIDWACGAGKAKCDPIQRGGDCYLPDTPYSHASYAFNIHYHWFQTDPRSCIFGGDAELTYVDPSYGSC | |||
GH17 | 38 | 358 | 0 |
IGAVYGRNGNNIPDATTAAALMQQYDISRVRIFDHDPSIIQAFASTQIRVMIAVTNEEIPAIAASQGSADDWVNKYVAPYIRLTNINAIAVGNEVITSRP DLSSSLVPAMQNIHNSLVRLGYDASIKVSSPHGIGLLDVSYPPSAGHFFDSLTAVVHPMLAFLQETKAPFMLNIYPFYSYQNSIVSGSVPLDYALFQPAS PVVDAGNGLVYNSLYDAQIDAVIAACLKLNKTVGVTVTETGWPSDGDPSYEPAANYWNARMYNQNLVKRSMNNSGTPMRPGVEFDAYIVSLYDENLRPTP PASAQHWGLFYVNGTHKYGFN |
Full Sequence |
---|
Protein Sequence Length: 521 Download |
MTFKRRSSTT MVSTARSTLL ATWVVFSLFW SLADATAIGA VYGRNGNNIP DATTAAALMQ 60 QYDISRVRIF DHDPSIIQAF ASTQIRVMIA VTNEEIPAIA ASQGSADDWV NKYVAPYIRL 120 TNINAIAVGN EVITSRPDLS SSLVPAMQNI HNSLVRLGYD ASIKVSSPHG IGLLDVSYPP 180 SAGHFFDSLT AVVHPMLAFL QETKAPFMLN IYPFYSYQNS IVSGSVPLDY ALFQPASPVV 240 DAGNGLVYNS LYDAQIDAVI AACLKLNKTV GVTVTETGWP SDGDPSYEPA ANYWNARMYN 300 QNLVKRSMNN SGTPMRPGVE FDAYIVSLYD ENLRPTPPAS AQHWGLFYVN GTHKYGFNYL 360 NGSDVPGGGG GGGGGNGSTP GSPPGSGGGG GGGSSGGAIP GQKVWCIAKS SASNTSLIQG 420 IDWACGAGKA KCDPIQRGGD CYLPDTPYSH ASYAFNIHYH WFQTDPRSCI FGGDAELTYV 480 DPSYGSCYYV PSGATRVVKR TLFRSLMMFV VALSLALVTV * |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.004 | 1 | 350 | 370 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-11 | 405 | 475 | 80 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 8.0e-29 | 405 | 489 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 7.0e-78 | 38 | 359 | 323 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_849556.1 | 0 | 20 | 502 | 7 | 488 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_001766544.1 | 0 | 29 | 491 | 2 | 437 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001771454.1 | 0 | 34 | 520 | 8 | 494 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002330523.1 | 0 | 36 | 493 | 25 | 455 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002514201.1 | 0 | 18 | 496 | 12 | 458 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 38 | 359 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 38 | 359 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 38 | 359 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 38 | 359 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 38 | 359 | 2 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |