Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s218_3V6.1 |
Family | CBM43 |
Protein Properties | Length: 500 Molecular Weight: 53563.7 Isoelectric Point: 7.4146 |
Chromosome | Chromosome/Scaffold: 218 Start: 20112 End: 23037 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 412 | 495 | 9.7e-34 |
WCVAKPGMNPPMLQAALDFACGPGGADCQPLQVGGSCYNPDTILDHSSYAFNSYYQRTKAAGGSCNFGGAATLTTTDPSHDTCK | |||
GH17 | 53 | 373 | 0 |
GINYGRIANDLPAPDEAIQQIRTMKIGRVKIFNSDATVLSALANTGLEVVSGLPNEDIPSVAQSQWAADQWVKKNVLSYYPATNIVSIVVGNELFSYPSM KSTWDKLIPAINNLHTSLAKNKLTDHIKLSTAVALDVLASSYPPSGGAFKEELVGPYLKPLLKYLYNSQSHLYVNVYPYFAWASDPDHIPLNYALFGAST PGVVDNGKAYYNLLDSQLDAVNAATEKVGYGQVRLALSETGWPSAGDANQLGCNLANAATYNRRLVRKMVSTSKVGTPLKPGVYIPTFIFALFNENQKTG QGTEKHWGLLYPNGTNVYSID |
Full Sequence |
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Protein Sequence Length: 500 Download |
MEAVGRRPCG FGKLDVLGRL TVLLLCAVLI SCQQLSAGGN RGSTYRMENH VMGINYGRIA 60 NDLPAPDEAI QQIRTMKIGR VKIFNSDATV LSALANTGLE VVSGLPNEDI PSVAQSQWAA 120 DQWVKKNVLS YYPATNIVSI VVGNELFSYP SMKSTWDKLI PAINNLHTSL AKNKLTDHIK 180 LSTAVALDVL ASSYPPSGGA FKEELVGPYL KPLLKYLYNS QSHLYVNVYP YFAWASDPDH 240 IPLNYALFGA STPGVVDNGK AYYNLLDSQL DAVNAATEKV GYGQVRLALS ETGWPSAGDA 300 NQLGCNLANA ATYNRRLVRK MVSTSKVGTP LKPGVYIPTF IFALFNENQK TGQGTEKHWG 360 LLYPNGTNVY SIDMTGTLSD GQYTPLSDNP IFTTAPPPTL PPGNVPSTTG TWCVAKPGMN 420 PPMLQAALDF ACGPGGADCQ PLQVGGSCYN PDTILDHSSY AFNSYYQRTK AAGGSCNFGG 480 AATLTTTDPS HDTCKFPTS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 7.0e-21 | 411 | 483 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 7.0e-42 | 411 | 496 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 4.0e-101 | 53 | 373 | 321 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM66024.1 | 0 | 51 | 498 | 26 | 458 | beta-1,3-glucanase-like protein [Arabidopsis thaliana] |
RefSeq | XP_001777261.1 | 0 | 47 | 499 | 1 | 453 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001780045.1 | 0 | 47 | 499 | 1 | 453 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001781801.1 | 0 | 52 | 490 | 1 | 425 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001784285.1 | 0 | 52 | 497 | 1 | 436 | predicted protein [Physcomitrella patens subsp. patens] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 52 | 374 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 52 | 375 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 52 | 375 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 52 | 375 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 52 | 375 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |