Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s270_88V6.3 |
Family | CBM43 |
Protein Properties | Length: 523 Molecular Weight: 56105.8 Isoelectric Point: 8.1785 |
Chromosome | Chromosome/Scaffold: 270 Start: 571871 End: 575067 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 435 | 518 | 7.5e-34 |
WCVAKSGIGQEMLQGALDFACGAGGADCQPLQAGGSCFNPNTIHDHSSYAFNSYYQKTKAAGGSCNFGGAAMLSTTDPSHGTCK | |||
GH17 | 76 | 396 | 0 |
GINYGRIADNLPSPDEAIQRIMDLKIGRVKIFNSDATVLSALANTGLEVVSALPNEDIPGVAQSQWAADQWVKKNVLAYYPATNIVSIVVGNELFSYPSM KPTWDKLMTAINNVHTSLAKDNLTSRIKLSSAVALDVLASSYPPSAGSFREELVGPYLQPLLKFLYNSQSHFYVNVYPYFAWASDPNNIPLNYALFGAST PGVVDNGKAYYNMLDGQLDAVNAALQKVGYGQVRLAISETGWPTAGDANQAGCNLANAATYNRRLVRKMVSPTNVGTPMRPGVYIPTFIFALFNEDQKTG QGTEKHWGLLYPNGTNVYSID |
Full Sequence |
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Protein Sequence Length: 523 Download |
MLGLRVGCRR RGAFPCLQGE MGASGRGQGG FWRWEFLRRI VVLLPLLLCP ALISCQTPGR 60 SGNAGSAYRM EKHVMGINYG RIADNLPSPD EAIQRIMDLK IGRVKIFNSD ATVLSALANT 120 GLEVVSALPN EDIPGVAQSQ WAADQWVKKN VLAYYPATNI VSIVVGNELF SYPSMKPTWD 180 KLMTAINNVH TSLAKDNLTS RIKLSSAVAL DVLASSYPPS AGSFREELVG PYLQPLLKFL 240 YNSQSHFYVN VYPYFAWASD PNNIPLNYAL FGASTPGVVD NGKAYYNMLD GQLDAVNAAL 300 QKVGYGQVRL AISETGWPTA GDANQAGCNL ANAATYNRRL VRKMVSPTNV GTPMRPGVYI 360 PTFIFALFNE DQKTGQGTEK HWGLLYPNGT NVYSIDMTGM LSDGQYSPLS DNPVFTSAPP 420 PTFSPGLVPS TSGTWCVAKS GIGQEMLQGA LDFACGAGGA DCQPLQAGGS CFNPNTIHDH 480 SSYAFNSYYQ KTKAAGGSCN FGGAAMLSTT DPSHGTCKFP IS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0003 | 300 | 388 | 92 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 8.0e-22 | 434 | 506 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 5.0e-41 | 434 | 519 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 1.0e-94 | 76 | 396 | 321 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM66024.1 | 0 | 74 | 520 | 26 | 457 | beta-1,3-glucanase-like protein [Arabidopsis thaliana] |
RefSeq | XP_001777261.1 | 0 | 70 | 522 | 1 | 453 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001780045.1 | 0 | 70 | 522 | 1 | 453 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001781801.1 | 0 | 75 | 514 | 1 | 426 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001784285.1 | 0 | 75 | 520 | 1 | 436 | predicted protein [Physcomitrella patens subsp. patens] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 75 | 397 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 75 | 398 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 75 | 398 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 75 | 398 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 75 | 398 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
BJ969972 | 212 | 14 | 225 | 0 |
BY990331 | 197 | 3 | 199 | 0 |
DC957258 | 181 | 343 | 523 | 0 |
BJ968666 | 207 | 14 | 220 | 0 |
CN203068 | 242 | 156 | 396 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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