Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s312_32V6.1 |
Family | CBM43 |
Protein Properties | Length: 517 Molecular Weight: 55017.4 Isoelectric Point: 6.1586 |
Chromosome | Chromosome/Scaffold: 312 Start: 245641 End: 247486 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 385 | 463 | 7.7e-25 |
WCISNENSDPVTLENGLNFACGADVEFCKAIQPSASCYLPSTIVSHAAWAFNNYWQKYKGAGGSCSFSGAGVLTSTDPN | |||
GH17 | 39 | 359 | 0 |
LGINYGTLGDNLPSPADAVAAIKAMKIGRVKLFSPNADILTALANTGMEVVVAVPNEEIVAVGASPAAATAWVRLHISPYHPEANIVVILVGNEIFTGTT FQSTWTSLLPATQNLHAAIESFGWSGQIRISTAVALDVLASSFPPSAGTFRSDIATSFVRPLLSFLTKTNSYLFVNVYPFLTYSSSSDINLSYAMFASTT DNVVDGGLTYTNLMDAQLDAVYAAATKLGFTSLRIAIGETGWPSAGDSTEVAATIDNAANYNRRLVRKILSTTQIGTPARPGVFIPTYIFALFNENLKPG VSSERNWGLLHPNLSPVYAID |
Full Sequence |
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Protein Sequence Length: 517 Download |
MSPPLLLSLC LTLLTCQCHG QAPLNAVSAD GYAQQSRTLG INYGTLGDNL PSPADAVAAI 60 KAMKIGRVKL FSPNADILTA LANTGMEVVV AVPNEEIVAV GASPAAATAW VRLHISPYHP 120 EANIVVILVG NEIFTGTTFQ STWTSLLPAT QNLHAAIESF GWSGQIRIST AVALDVLASS 180 FPPSAGTFRS DIATSFVRPL LSFLTKTNSY LFVNVYPFLT YSSSSDINLS YAMFASTTDN 240 VVDGGLTYTN LMDAQLDAVY AAATKLGFTS LRIAIGETGW PSAGDSTEVA ATIDNAANYN 300 RRLVRKILST TQIGTPARPG VFIPTYIFAL FNENLKPGVS SERNWGLLHP NLSPVYAIDL 360 TGQIYDSQYS PNSNSSPLQT GSGTWCISNE NSDPVTLENG LNFACGADVE FCKAIQPSAS 420 CYLPSTIVSH AAWAFNNYWQ KYKGAGGSCS FSGAGVLTST DPNVDVFRSK PTIIYRGCAR 480 EFNSPDIMLL RLWSLCVPAL VKISSQKLHG EVRAAG* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.007 | 275 | 348 | 77 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 4.0e-8 | 384 | 443 | 65 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 4.0e-19 | 384 | 462 | 79 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 6.0e-101 | 39 | 359 | 322 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_001759996.1 | 0 | 33 | 371 | 1 | 338 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001777261.1 | 0 | 35 | 468 | 2 | 449 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001779924.1 | 0 | 13 | 371 | 14 | 373 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001781801.1 | 0 | 39 | 463 | 1 | 425 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001784285.1 | 0 | 39 | 462 | 1 | 428 | predicted protein [Physcomitrella patens subsp. patens] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 39 | 360 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 39 | 361 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 39 | 361 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 39 | 361 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 39 | 361 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |