Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s325_5V6.1 |
Family | CBM43 |
Protein Properties | Length: 329 Molecular Weight: 36173.1 Isoelectric Point: 7.1755 |
Chromosome | Chromosome/Scaffold: 325 Start: 43630 End: 47212 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 27 | 168 | 1.3e-24 |
VKYGLEGSREEATSPEEVVRLLKKHSVKRVTFFGANPSILRALGNSSINVKIGLYNFEAEHLAEDSNNALQWVRTNISPFMRDTNITGLYVGADVRSQMV PLAMHLELAVGNLIDALGEEQLTSRIQVSFSSSMSTYSDEFP | |||
CBM43 | 209 | 289 | 4.3e-26 |
WCVVRRDANVYDVQSALNWACARVNCGPTYAGGRCFIPNSIWDHSSWAFNAYFNSMNGAPESCNFSGTAYISSNDPSSEQC |
Full Sequence |
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Protein Sequence Length: 329 Download |
MGPKCAFLLV HCLFLLLLQG TVEAGVVKYG LEGSREEATS PEEVVRLLKK HSVKRVTFFG 60 ANPSILRALG NSSINVKIGL YNFEAEHLAE DSNNALQWVR TNISPFMRDT NITGLYVGAD 120 VRSQMVPLAM HLELAVGNLI DALGEEQLTS RIQVSFSSSM STYSDEFPVA SLLTSKIGQN 180 QTFVIDIRNY WTPTFTNHRR LGDGRGFVWC VVRRDANVYD VQSALNWACA RVNCGPTYAG 240 GRCFIPNSIW DHSSWAFNAY FNSMNGAPES CNFSGTAYIS SNDPSSEQCF YQGTNRALVV 300 GAANTHVRTV ALSLTASLFT YLLVHLVL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 2.0e-13 | 40 | 168 | 134 | + Glycosyl hydrolases family 17. | ||
pfam07983 | X8 | 3.0e-15 | 209 | 278 | 76 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-28 | 209 | 291 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI16509.1 | 3e-24 | 44 | 291 | 43 | 301 | unnamed protein product [Vitis vinifera] |
RefSeq | XP_001781380.1 | 9e-20 | 209 | 285 | 1 | 83 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001782238.1 | 0 | 209 | 285 | 1 | 77 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_002300169.1 | 9e-19 | 208 | 285 | 1 | 79 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002518089.1 | 8e-20 | 206 | 296 | 24 | 115 | hydrolase, hydrolyzing O-glycosyl compounds, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 0.000000004 | 209 | 295 | 13 | 101 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3f55_D | 0.00000002 | 23 | 193 | 1 | 161 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3f55_C | 0.00000002 | 23 | 193 | 1 | 161 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3f55_B | 0.00000002 | 23 | 193 | 1 | 161 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 3f55_A | 0.00000002 | 23 | 193 | 1 | 161 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |