Basic Information | |
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Species | Physcomitrella patens |
Cazyme ID | Pp1s389_50V6.1 |
Family | CBM43 |
Protein Properties | Length: 436 Molecular Weight: 46751.3 Isoelectric Point: 4.8633 |
Chromosome | Chromosome/Scaffold: 389 Start: 323449 End: 326737 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 308 | 390 | 1.6e-28 |
WCIAKQGISETALQISIDFACGMGNVNCTAIQPNGTCFLPDTRYSHASYAMNQVYVNSFNGTSACNFQGAARITTTDPSYGSC | |||
GH17 | 2 | 291 | 0 |
SQVRIYDSDPTVLAAFQGSNIQLVIGLLNSELDDIGASYASASAWVASKILPYVNSTNIFAIGVGNEVLTGFTNASSLLVPAMNNIYNALTANNLQSIKV SSPCSMELLAQSYLPSSGKFSSNYSDIPVLLEFLTRTSSPYMVNVYPWKAYTAQRDAISLDYALFYPNAGVFDSGASYTYTNLFDAQVDAVHAALTKANH SDLVVVVSETGWPTAGDTGEAGASIQNAQTYNANLVKRVMSNTGTPARPGAMLNVFLYELYNENLNVGPASQRNFGLFNPDSTPVYAINF |
Full Sequence |
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Protein Sequence Length: 436 Download |
MSQVRIYDSD PTVLAAFQGS NIQLVIGLLN SELDDIGASY ASASAWVASK ILPYVNSTNI 60 FAIGVGNEVL TGFTNASSLL VPAMNNIYNA LTANNLQSIK VSSPCSMELL AQSYLPSSGK 120 FSSNYSDIPV LLEFLTRTSS PYMVNVYPWK AYTAQRDAIS LDYALFYPNA GVFDSGASYT 180 YTNLFDAQVD AVHAALTKAN HSDLVVVVSE TGWPTAGDTG EAGASIQNAQ TYNANLVKRV 240 MSNTGTPARP GAMLNVFLYE LYNENLNVGP ASQRNFGLFN PDSTPVYAIN FGGSNSGGNG 300 YGYGRRSWCI AKQGISETAL QISIDFACGM GNVNCTAIQP NGTCFLPDTR YSHASYAMNQ 360 VYVNSFNGTS ACNFQGAARI TTTDPSYGSC VYPASTISYS GSHMSTRRFS SAQQLYQLFF 420 LLFAIICWAY TGAEL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 3.0e-15 | 307 | 378 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-32 | 307 | 392 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-77 | 4 | 291 | 290 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN39797.1 | 0 | 1 | 393 | 53 | 471 | unknown [Picea sitchensis] |
RefSeq | NP_178637.2 | 0 | 1 | 393 | 51 | 469 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_001751439.1 | 0 | 1 | 386 | 30 | 418 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001767901.1 | 0 | 1 | 424 | 54 | 478 | predicted protein [Physcomitrella patens subsp. patens] |
RefSeq | XP_001784088.1 | 0 | 1 | 435 | 35 | 469 | predicted protein [Physcomitrella patens subsp. patens] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 1 | 291 | 27 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 4 | 291 | 30 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 4 | 291 | 30 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_B | 0 | 1 | 291 | 29 | 314 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_A | 0 | 1 | 291 | 29 | 314 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |