y
Basic Information | |
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Species | Manihot esculenta |
Cazyme ID | cassava4.1_008433m |
Family | CBM43 |
Protein Properties | Length: 421 Molecular Weight: 45202.5 Isoelectric Point: 5.5426 |
Chromosome | Chromosome/Scaffold: 12622 Start: 206773 End: 209340 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 26 | 186 | 3e-24 |
SIQVLNLCDSTPEVLQAMSKSGHPLAMSVSDEDLSGVSGSVLMAESWLRTHVLGHFPATNITTIVVGDTLLCQDGRNHNWGLVLPSLKNIYYSLTRWGLE REIKVSAAFSSNCFEPNSAVPINDLAEKVIKPLIQFLHSINSTYSINLPPDFSPLSDETVS | |||
CBM43 | 333 | 415 | 1.9e-33 |
WCVAKPSVPVETLQDAMDYACGDGGADCTEIMPHGSCFYPDTVVAHASYAFNSYFQKSKRNGGTCNFGGTAMLVSSDPSFLHC |
Full Sequence |
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Protein Sequence Length: 421 Download |
MLKMGWLVFN LFLFCFLGLT GAGQESIQVL NLCDSTPEVL QAMSKSGHPL AMSVSDEDLS 60 GVSGSVLMAE SWLRTHVLGH FPATNITTIV VGDTLLCQDG RNHNWGLVLP SLKNIYYSLT 120 RWGLEREIKV SAAFSSNCFE PNSAVPINDL AEKVIKPLIQ FLHSINSTYS INLPPDFSPL 180 SDETVSLVSS FSELLQNFGS LALNEANVIV TAPKQNVPKN RKLSNIESKI LKPESSQPPL 240 HSSIGSSVPS NVAKNPHSPL SRAASPPLSF PRASLPPLSY PVESPPPMAF PFAPEQPPPT 300 GPVTAPYGYS FPPCNPDNTI SPAPEAGVVQ ELWCVAKPSV PVETLQDAMD YACGDGGADC 360 TEIMPHGSCF YPDTVVAHAS YAFNSYFQKS KRNGGTCNFG GTAMLVSSDP SFLHCRFLLS 420 * 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 2.0e-11 | 27 | 178 | 156 | + Glycosyl hydrolases family 17. | ||
pfam07983 | X8 | 1.0e-25 | 332 | 404 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-41 | 332 | 417 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CBI33700.1 | 0 | 1 | 420 | 1 | 357 | unnamed protein product [Vitis vinifera] |
EMBL | CBI36295.1 | 0 | 1 | 233 | 1 | 233 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_201547.1 | 0 | 4 | 420 | 1 | 380 | glycosyl hydrolase family protein 17 [Arabidopsis thaliana] |
RefSeq | XP_002279597.1 | 0 | 1 | 420 | 1 | 413 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002525263.1 | 0 | 1 | 416 | 1 | 418 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2jon_A | 1e-18 | 319 | 417 | 2 | 96 | A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 |
PDB | 2cyg_A | 0.000000000002 | 26 | 178 | 26 | 178 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0.000000001 | 24 | 178 | 25 | 182 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0.000000001 | 24 | 178 | 25 | 182 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0.000000001 | 24 | 178 | 25 | 182 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |