Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna03446.1-v1.0-hybrid |
Family | CBM43 |
Protein Properties | Length: 465 Molecular Weight: 49942.1 Isoelectric Point: 4.5228 |
Chromosome | Chromosome/Scaffold: 3 Start: 13871646 End: 13873261 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 376 | 459 | 1.3e-33 |
WCVANANAGEEKLQAALDYACGEGGADCRPITDGSTCFNPNTLEAHASYAFNSYYQKKARGTGTCNFGGAAYVVSQPPRYGTCE | |||
GH17 | 28 | 345 | 0 |
IGINYGRIANNLPAPTKVVDLLKSQGITNVKLYDTDAAVLTALADSNISVIVCLPNELLSSAAKDQSFADKWVQANISHYYPKTQIEAIAVGNEVLDDKN NATDFLVPAMKNIHASLKKYNLDSSIKLSSPISLTALQSSYPPSAGSFKPDLVQPVIKPLLDFLQQTGSYLMVNAYPFFAYADNSDEISLDYALLKQNPG NVDSGNGLRYMSLLEAQLDAVVSAMSAIGNEDLKMVVTETGWPSNGDENEVGAGKENAAAYNGNLVRRVLTGGGTPLKPQEPLNVYLFALFNENQKPGPT SERNYGLFYPDEMKVYEI |
Full Sequence |
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Protein Sequence Length: 465 Download |
MTTFTFSVLA SLLLSFFSVA FAAEKGNIGI NYGRIANNLP APTKVVDLLK SQGITNVKLY 60 DTDAAVLTAL ADSNISVIVC LPNELLSSAA KDQSFADKWV QANISHYYPK TQIEAIAVGN 120 EVLDDKNNAT DFLVPAMKNI HASLKKYNLD SSIKLSSPIS LTALQSSYPP SAGSFKPDLV 180 QPVIKPLLDF LQQTGSYLMV NAYPFFAYAD NSDEISLDYA LLKQNPGNVD SGNGLRYMSL 240 LEAQLDAVVS AMSAIGNEDL KMVVTETGWP SNGDENEVGA GKENAAAYNG NLVRRVLTGG 300 GTPLKPQEPL NVYLFALFNE NQKPGPTSER NYGLFYPDEM KVYEIPLTAA ELSKDQSTPV 360 NESKTQVPTQ PSGNTWCVAN ANAGEEKLQA ALDYACGEGG ADCRPITDGS TCFNPNTLEA 420 HASYAFNSYY QKKARGTGTC NFGGAAYVVS QPPRYGTCEF PTGY* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.001 | 93 | 338 | 249 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 9.0e-24 | 375 | 447 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-39 | 375 | 460 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 5.0e-100 | 28 | 345 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 28 | 345 | 1 | 310 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 28 | 345 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 28 | 345 | 1 | 304 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_D | 0 | 28 | 345 | 2 | 313 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_C | 0 | 28 | 345 | 2 | 313 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |