Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna11332.1-v1.0-hybrid |
Family | CBM43 |
Protein Properties | Length: 499 Molecular Weight: 54174.2 Isoelectric Point: 5.0583 |
Chromosome | Chromosome/Scaffold: 1 Start: 4368506 End: 4371302 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 366 | 448 | 3.1e-31 |
WCIASSKASEADLQNALDWACGSGNVDCTPIQPSQPCFEPDNTVSHASYAFNVYYQQNGATDIACSFGGSGIKVDKNPSYDSC | |||
GH17 | 26 | 344 | 0 |
VGICYGRNADDLPTPDKAAQLVQLHNIKYVRIYDSNIQVLKAFANTGVELMIGVPNSDLLPFSQFQTNADTWLKNSILPYYPATKITYITVGAEVTETTG NVSALVVPAMRNVLTALKKAGLSKKIKVSSTHSLGVLSRSFPPSAGAFSSSYASFLKPLLEFLAENQSPFMIDIYPYYAYRDSPSNVTLDYALFQASSEV IDPNTGLLYTNMFDAQIDAIYYALMGLNFKTINVMVTETGWPSKGSPKETAATPDNAQTYNTNLIRHVINNTGTPAKPGEKVDTYLFSLFNENRKPGLES ERNWGLFYPDQTSVYNLDF |
Full Sequence |
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Protein Sequence Length: 499 Download |
MGCGFRLVFA ILQLLVILDL CEGSIVGICY GRNADDLPTP DKAAQLVQLH NIKYVRIYDS 60 NIQVLKAFAN TGVELMIGVP NSDLLPFSQF QTNADTWLKN SILPYYPATK ITYITVGAEV 120 TETTGNVSAL VVPAMRNVLT ALKKAGLSKK IKVSSTHSLG VLSRSFPPSA GAFSSSYASF 180 LKPLLEFLAE NQSPFMIDIY PYYAYRDSPS NVTLDYALFQ ASSEVIDPNT GLLYTNMFDA 240 QIDAIYYALM GLNFKTINVM VTETGWPSKG SPKETAATPD NAQTYNTNLI RHVINNTGTP 300 AKPGEKVDTY LFSLFNENRK PGLESERNWG LFYPDQTSVY NLDFTGKNAV DMTTNNVTSS 360 NATTTWCIAS SKASEADLQN ALDWACGSGN VDCTPIQPSQ PCFEPDNTVS HASYAFNVYY 420 QQNGATDIAC SFGGSGIKVD KNPSYDSCLY MTAGSNKTIA SSNTTAISST SSSATVKGVP 480 AWIFTCFLAT FISFLFRS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 2.0e-9 | 24 | 335 | 325 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-21 | 366 | 437 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 8.0e-38 | 366 | 450 | 85 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-105 | 26 | 344 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 26 | 344 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 26 | 345 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 26 | 345 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 26 | 345 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 26 | 345 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |