Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna24806.1-v1.0-hybrid |
Family | CBM43 |
Protein Properties | Length: 453 Molecular Weight: 48767.9 Isoelectric Point: 4.651 |
Chromosome | Chromosome/Scaffold: 3 Start: 28427797 End: 28429652 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 319 | 401 | 1.7e-32 |
CVAKSEADPDKLEDGLNWACGQGQADCTPIQQGQGCYLPNTLVNHASYAYNDYYQRMQSVGGTCDFDGTAKTTTIDPSYGSCK | |||
GH17 | 2 | 304 | 0 |
VAILTAHQITHVRLYDADAHMLRALSNSGIEVVVGITNEEVLGIGESPSVAAAWVNKNVAPYLPSTNITAIAVGSEVLTQIPHASSVLVSAMNYIHKALV ATNLNFQVKVSTPQSMDVIPKAFPPSTATFDPSWNSTVFQILQFLKNTNSYYMLNAYPYYGYTKGDGIFPIDYALFQPLPSVKQIVDPNTLFHYNSMFDA MVDATYYSIDALNFTGISVVVTESGWPWLGGSNEPDASVENAQTYTNNLIRRVLNDSGPPSKPTFPINAYIYELFNEDKRPGPVSEKNWGVLFTNGSTVY PLT |
Full Sequence |
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Protein Sequence Length: 453 Download |
MVAILTAHQI THVRLYDADA HMLRALSNSG IEVVVGITNE EVLGIGESPS VAAAWVNKNV 60 APYLPSTNIT AIAVGSEVLT QIPHASSVLV SAMNYIHKAL VATNLNFQVK VSTPQSMDVI 120 PKAFPPSTAT FDPSWNSTVF QILQFLKNTN SYYMLNAYPY YGYTKGDGIF PIDYALFQPL 180 PSVKQIVDPN TLFHYNSMFD AMVDATYYSI DALNFTGISV VVTESGWPWL GGSNEPDASV 240 ENAQTYTNNL IRRVLNDSGP PSKPTFPINA YIYELFNEDK RPGPVSEKNW GVLFTNGSTV 300 YPLTLGTSTP TGNSSGLFCV AKSEADPDKL EDGLNWACGQ GQADCTPIQQ GQGCYLPNTL 360 VNHASYAYND YYQRMQSVGG TCDFDGTAKT TTIDPSYGSC KFSGSSNSST IGGLTPVSAI 420 APSTAVGGWS SNLKVSQLQY LIPAAFLTLV LF* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0005 | 216 | 296 | 84 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 3.0e-22 | 317 | 388 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 6.0e-35 | 317 | 395 | 79 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 7.0e-77 | 2 | 304 | 303 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 1 | 305 | 18 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1ghs_B | 0 | 1 | 305 | 18 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 1ghs_A | 0 | 1 | 305 | 18 | 306 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_B | 9.94922e-44 | 1 | 305 | 20 | 314 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3ur8_A | 9.94922e-44 | 1 | 305 | 20 | 314 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
Sequence Alignments (This image is cropped. Click for full image.) |
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