Basic Information | |
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Species | Fragaria vesca |
Cazyme ID | mrna30530.1-v1.0-hybrid |
Family | CBM43 |
Protein Properties | Length: 505 Molecular Weight: 53891.1 Isoelectric Point: 4.6244 |
Chromosome | Chromosome/Scaffold: 1 Start: 9757047 End: 9760824 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 370 | 451 | 1.6e-30 |
CTAKDGTDTKMLQAALDWACGPGKVDCSPLLQGEPCYEPDNVISHATYAFDTYYHQMGKTSASCDFNGVAAITTTDPSHGSC | |||
GH17 | 32 | 351 | 0 |
IGVNIGTSLSDMPHPTQVVALLKAQQIRHVRLYDADRAMLVALANTGIQVIISVPNDQILGIGQSNSTAANWVSQNVVAHYPATNITAISVGSEVLTAVP NTAKILVSALKYIHSALVASNLDSQIKVSTPLSSSIILDSFPPSQAFFNRSLNPVLVPMLSFLQSTGSFLMLNVYPYYDYMQSNGVIALDYALLNPLQAN KEAVDSNTLLHYSNVFDAVVDAAYYAMAFLNFTNVPVVVTESGWPSKGDSNEPDATLENANTYNSNLIRHVLNKTGTPKRPGLAVSTFIYELYNEDTKPG PVSEKNWGLFDANGTPIYIL |
Full Sequence |
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Protein Sequence Length: 505 Download |
MGFLFGSESM ALTLLLLLLA LSVATADEDV FIGVNIGTSL SDMPHPTQVV ALLKAQQIRH 60 VRLYDADRAM LVALANTGIQ VIISVPNDQI LGIGQSNSTA ANWVSQNVVA HYPATNITAI 120 SVGSEVLTAV PNTAKILVSA LKYIHSALVA SNLDSQIKVS TPLSSSIILD SFPPSQAFFN 180 RSLNPVLVPM LSFLQSTGSF LMLNVYPYYD YMQSNGVIAL DYALLNPLQA NKEAVDSNTL 240 LHYSNVFDAV VDAAYYAMAF LNFTNVPVVV TESGWPSKGD SNEPDATLEN ANTYNSNLIR 300 HVLNKTGTPK RPGLAVSTFI YELYNEDTKP GPVSEKNWGL FDANGTPIYI LRLTGSGAVL 360 ANDTTNQTFC TAKDGTDTKM LQAALDWACG PGKVDCSPLL QGEPCYEPDN VISHATYAFD 420 TYYHQMGKTS ASCDFNGVAA ITTTDPSHGS CVFPGSLGKN GTLVNITAPS LNSTSGDSSA 480 YNFQSNAFTS IVLIHVLISC AVFL* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 5.0e-8 | 61 | 344 | 292 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-17 | 368 | 439 | 81 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 3.0e-38 | 368 | 453 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-82 | 32 | 349 | 318 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 32 | 349 | 1 | 308 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_B | 0 | 32 | 354 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur8_A | 0 | 32 | 354 | 3 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3ur7_B | 0 | 32 | 354 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 32 | 354 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |