| Basic Information | |
|---|---|
| Species | Oryza sativa |
| Cazyme ID | LOC_Os06g46690.1 |
| Family | GT47 |
| Protein Properties | Length: 478 Molecular Weight: 51495.9 Isoelectric Point: 9.9912 |
| Chromosome | Chromosome/Scaffold: 6 Start: 28363631 End: 28368048 |
| Description | Exostosin family protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GT47 | 135 | 426 | 0 |
| EKRFKVWTYREGEPPVVQKGGAAFAGNDGIEGHLIAELDSSGGGGRHRARHPGEAHAFFLPISVASIAGYVYRRDMIDFWDPQLRLVAGYVDGLAAMYPF WNRSRGADHFLVSCHQWAPILSAAKAELRGNAIRVMCDADMSDGFDPATDVALPPVVASARATPPQGRVASERTVLAFFAAGGGGGGAVREALLARWEGR DDRVVVYGRLPAGVDHGELMRRARFCLCPCGGGEGAAAASRRVVEAITAGCVPVLVDDGGYSPPFSDVLDWARFSVAVPAERVGEIKDILGG | |||
| Full Sequence |
|---|
| Protein Sequence Length: 478 Download |
| MASKNSCACH GVVVTLASCL LLVAAAVSVS VLAAHVAVGR VWSPAGAAAA AGHHHSLSPA 60 WVPSPSSRHA HHARELVNRR VQVGRMEAGL VQARVSIRRA SRTRSCTPDD GGGFIPRGAV 120 YRDAYAFHQS YIEMEKRFKV WTYREGEPPV VQKGGAAFAG NDGIEGHLIA ELDSSGGGGR 180 HRARHPGEAH AFFLPISVAS IAGYVYRRDM IDFWDPQLRL VAGYVDGLAA MYPFWNRSRG 240 ADHFLVSCHQ WAPILSAAKA ELRGNAIRVM CDADMSDGFD PATDVALPPV VASARATPPQ 300 GRVASERTVL AFFAAGGGGG GAVREALLAR WEGRDDRVVV YGRLPAGVDH GELMRRARFC 360 LCPCGGGEGA AAASRRVVEA ITAGCVPVLV DDGGYSPPFS DVLDWARFSV AVPAERVGEI 420 KDILGGVSDR RYGVLRRRVL RVRRHFRLNR PPAKRFDVVN MVIHSIWLRR LNLSLPY* 480 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam03016 | Exostosin | 1.0e-37 | 134 | 424 | 305 | + Exostosin family. The EXT family is a family of tumour suppressor genes. Mutations of EXT1 on 8q24.1, EXT2 on 11p11-13, and EXT3 on 19p have been associated with the autosomal dominant disorder known as hereditary multiple exostoses (HME). This is the most common known skeletal dysplasia. The chromosomal locations of other EXT genes suggest association with other forms of neoplasia. EXT1 and EXT2 have both been shown to encode a heparan sulphate polymerase with both D-glucuronyl (GlcA) and N-acetyl-D-glucosaminoglycan (GlcNAC) transferase activities. The nature of the defect in heparan sulphate biosynthesis in HME is unclear. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0003824 | catalytic activity |
| GO:0005623 | cell |
| GO:0008150 | biological_process |
| GO:0008152 | metabolic process |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI21065.1 | 0 | 77 | 476 | 9 | 401 | unnamed protein product [Vitis vinifera] |
| GenBank | EEE66225.1 | 0 | 1 | 339 | 1 | 339 | hypothetical protein OsJ_22377 [Oryza sativa Japonica Group] |
| RefSeq | NP_001058374.1 | 0 | 1 | 477 | 1 | 477 | Os06g0680900 [Oryza sativa (japonica cultivar-group)] |
| Swiss-Prot | Q3E9A4 | 0 | 86 | 476 | 85 | 466 | GLYT5_ARATH RecName: Full=Probable glycosyltransferase At5g20260 |
| RefSeq | XP_002515488.1 | 0 | 77 | 475 | 80 | 468 | catalytic, putative [Ricinus communis] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| xylogalacturonan biosynthesis | RXN-9589 | EC-2.4.2.41 | xylogalacturonan β-1,3-xylosyltransferase |
